Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548h in CA Colon Graudens Cluster 5 Table contains all genes in the CA Colon Graudens cluster number 5. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548h 159 ADSS adenylosuccinate synthase [Source:HGNC Symbol;Acc:292] P 3178 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:5031] zzz999 10244 RABEPK Rab9 effector protein with kelch motifs [Source:HGNC Symbol;Acc:16896] T 56616 DIABLO diablo, IAP-binding mitochondrial protein [Source:HGNC Symbol;Acc:21528] zzz999 29105 C16orf80 chromosome 16 open reading frame 80 [Source:HGNC Symbol;Acc:29523] zzz999 51582 AZIN1 antizyme inhibitor 1 [Source:HGNC Symbol;Acc:16432] zzz999 51657 STYXL1 serine/threonine/tyrosine interacting-like 1 [Source:HGNC Symbol;Acc:18165] zzz999 912 CD1D CD1d molecule [Source:HGNC Symbol;Acc:1637] zzz999 3150 HMGN1 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:4984] zzz999 6605 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:11109] T 56647 BCCIP BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:978] zzz999 83787 ARMC10 armadillo repeat containing 10 [Source:HGNC Symbol;Acc:21706] zzz999 23162 MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:6884] zzz999 5723 PSPH phosphoserine phosphatase [Source:HGNC Symbol;Acc:9577] zzz999 5092 PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:HGNC Symbol;Acc:8646] zzz999 57488 ESYT2 extended synaptotagmin-like protein 2 [Source:HGNC Symbol;Acc:22211] zzz999 6318 SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4 [Source:HGNC Symbol;Acc:10570] zzz999 55273 TMEM100 transmembrane protein 100 [Source:HGNC Symbol;Acc:25607] zzz999 57820 CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:19437] zzz999 6635 SNRPE small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] zzz999 55156 ARMC1 armadillo repeat containing 1 [Source:HGNC Symbol;Acc:17684] zzz999 2079 ERH enhancer of rudimentary homolog (Drosophila) [Source:HGNC Symbol;Acc:3447] zzz999 10971 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide [Source:HGNC Symbol;Acc:12854] zzz999 51571 FAM49B family with sequence similarity 49, member B [Source:HGNC Symbol;Acc:25216] zzz999 404636 FAM45A family with sequence similarity 45, member A [Source:HGNC Symbol;Acc:31793] zzz999 10273 STUB1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:11427] zzz999 10189 THOC4 THO complex 4 [Source:HGNC Symbol;Acc:19071] zzz999 79731 NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:26274] zzz999 51622 C7orf28B chromosome 7 open reading frame 28B [Source:HGNC Symbol;Acc:21717] zzz999 9694 TTC35 tetratricopeptide repeat domain 35 [Source:HGNC Symbol;Acc:28963] zzz999 1164 CKS2 CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000] P T 1974 EIF4A2 eukaryotic translation initiation factor 4A2 [Source:HGNC Symbol;Acc:3284] zzz999 11130 ZWINT ZW10 interactor [Source:HGNC Symbol;Acc:13195] zzz999 8883 NAE1 NEDD8 activating enzyme E1 subunit 1 [Source:HGNC Symbol;Acc:621] zzz999 47 ACLY ATP citrate lyase [Source:HGNC Symbol;Acc:115] zzz999 996 CDC27 cell division cycle 27 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1728] zzz999 4437 MSH3 mutS homolog 3 (E. coli) [Source:HGNC Symbol;Acc:7326] zzz999 51056 LAP3 leucine aminopeptidase 3 [Source:HGNC Symbol;Acc:18449] zzz999 81853 TMEM14B transmembrane protein 14B [Source:HGNC Symbol;Acc:21384] zzz999 84946 LTV1 LTV1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21173] zzz999 7534 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] zzz999 84223 IQCG IQ motif containing G [Source:HGNC Symbol;Acc:25251] zzz999 51103 NDUFAF1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 [Source:HGNC Symbol;Acc:18828] zzz999 471 ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:HGNC Symbol;Acc:794] zzz999 23471 TRAM1 translocation associated membrane protein 1 [Source:HGNC Symbol;Acc:20568] P 51023 MRPS18C mitochondrial ribosomal protein S18C [Source:HGNC Symbol;Acc:16633] zzz999 25926 NOL11 nucleolar protein 11 [Source:HGNC Symbol;Acc:24557] zzz999 8161 COIL coilin [Source:HGNC Symbol;Acc:2184] zzz999 441531 PGAM4 phosphoglycerate mutase family member 4 [Source:HGNC Symbol;Acc:21731] zzz999 51187 RSL24D1 ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:18479] T 5687 PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 [Source:HGNC Symbol;Acc:9535] zzz999 5683 PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2 [Source:HGNC Symbol;Acc:9531] zzz999 84154 RPF2 ribosome production factor 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20870] zzz999 4191 MDH2 malate dehydrogenase 2, NAD (mitochondrial) [Source:HGNC Symbol;Acc:6971] zzz999 84259 DCUN1D5 DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:HGNC Symbol;Acc:28409] zzz999 54554 WDR5B WD repeat domain 5B [Source:HGNC Symbol;Acc:17826] zzz999 10606 PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:HGNC Symbol;Acc:8587] zzz999 3185 HNRNPF heterogeneous nuclear ribonucleoprotein F [Source:HGNC Symbol;Acc:5039] zzz999 23480 SEC61G Sec61 gamma subunit [Source:HGNC Symbol;Acc:18277] zzz999 997 CDC34 cell division cycle 34 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1734] zzz999 9419 CRIPT cysteine-rich PDZ-binding protein [Source:HGNC Symbol;Acc:14312] P T 11199 ANXA10 annexin A10 [Source:HGNC Symbol;Acc:534] zzz999 6634 SNRPD3 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:P62318] zzz999 80218 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:HGNC Symbol;Acc:29533] zzz999 56943 ENY2 enhancer of yellow 2 homolog (Drosophila) [Source:HGNC Symbol;Acc:24449] zzz999 113174 SAAL1 serum amyloid A-like 1 [Source:HGNC Symbol;Acc:25158] zzz999 3198 HOXA1 homeobox A1 [Source:HGNC Symbol;Acc:5099] zzz999 6629 SNRPB2 small nuclear ribonucleoprotein polypeptide B [Source:HGNC Symbol;Acc:11155] zzz999 10935 PRDX3 peroxiredoxin 3 [Source:HGNC Symbol;Acc:9354] zzz999 6233 RPS27A ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] zzz999 642 BLMH bleomycin hydrolase [Source:HGNC Symbol;Acc:1059] zzz999 1975 EIF4B eukaryotic translation initiation factor 4B [Source:HGNC Symbol;Acc:3285] zzz999 222 ALDH3B2 aldehyde dehydrogenase 3 family, member B2 [Source:HGNC Symbol;Acc:411] zzz999 343069 HNRNPCL1 heterogeneous nuclear ribonucleoprotein C-like 1 [Source:HGNC Symbol;Acc:29295] zzz999 8394 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha [Source:HGNC Symbol;Acc:8994] zzz999 79009 DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 [Source:HGNC Symbol;Acc:17906] zzz999 10951 CBX1 chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] T 6434 TRA2B transformer 2 beta homolog (Drosophila) [Source:HGNC Symbol;Acc:10781] P T 10480 EIF3M eukaryotic translation initiation factor 3, subunit M [Source:HGNC Symbol;Acc:24460] zzz999 113802 HENMT1 HEN1 methyltransferase homolog 1 (Arabidopsis) [Source:HGNC Symbol;Acc:26400] zzz999 6170 RPL39 ribosomal protein L39 [Source:HGNC Symbol;Acc:10350] zzz999 6950 TCP1 t-complex 1 [Source:HGNC Symbol;Acc:11655] T 8891 EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa [Source:HGNC Symbol;Acc:3259] zzz999 56941 C3orf37 chromosome 3 open reading frame 37 [Source:HGNC Symbol;Acc:24446] zzz999 6309 SC5DL sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like [Source:HGNC Symbol;Acc:10547] T 11016 ATF7 activating transcription factor 7 [Source:HGNC Symbol;Acc:792] zzz999

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